Rhys Newell

@rhysnewell

Bioinformatics Software Engineer @ Microba. PhD in Bioinformatics at Centre for Microbiome Research, QUT

Microba LifeSciences Sydney, Australia

Followers

Following

Public Repos

Private Repos

Language Breakdown

Lines of code distribution across 20 owned repositories

110.4M Total LOC

Jupyter Notebook

103,825,929 lines

94.0%

N/A

Rust

3,680,548 lines

3.3%

N/A

Python

1,655,263 lines

1.5%

N/A

HTML

948,423 lines

0.9%

N/A

202,315 lines

0.2%

N/A

Other

82,010 lines

0.1%

N/A

I-Shaped Developer

I-shaped

Specialist — deep expertise in Jupyter Notebook

Jupyter Notebook

Rust

Python

HTML

Collaboration Network

Global Impact visualization

LIVE

0 active collaborators

Repos

PRs

Growth

+18%

Top Collaborators

No collaborator data yet.

Coding Streak

Contribution activity over the past year

1 day

627

Contributions

128

Commits

Pull Requests

Jun Jul Aug Sep Oct Nov Dec Jan Feb Mar Apr May Jun

Based on GitHub activity

Less

Followers 73

Rustem

@rustem-musaev

𝚝𝚒𝚎𝚗𝚍𝚞

@tiendu

Vijini Mallawaarachchi

@Vini2

Kruthi Rao

@InspireKruthirao

Eman Etoom

@EmanEtoom

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Following

35 total

Jess Hammer

@jess-hammer

ESM

@eilishmcmaster

Kristoffer

@ksahlin

Thanh Lee

@thanhleviet

Luiz Irber

@luizirber

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Synced via GitHub

Top Repositories

aviary

A hybrid assembly and MAG recovery pipeline (and more!)

107 16

Python

Lorikeet

Strain resolver for metagenomics

80 9

Rust

rosella

Metagenomic Binning Algorithm

53 2

Rust

fftconvolve

Rust implementations of Fast Fourier Transform convolution and correlation for n-dimensional arrays

50 4

Rust

ChIP-R

Assessing the reproducibility of proccessed ChIP-seq peaks

13 4

Python

fast-nnt

fast-nnt (read Fast Ent) is a simple Rust implementation of the Neighbor Net algorithm

2 0

Rust

rust-cargo-musl-action

2 0

Dockerfile

flight

Python module handling calls to UMAP and HDBSCAN for Lorikeet and Rosella

1 2

Python

CoverM

Read coverage calculator for metagenomics

1 0

Rust

ftms_mapper

FT-MS + metabolomics playground

1 0

Python

Open Source Impact

Contributions to external projects

151 merged PRs

No external contributions found.